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◇ arXiv2026-09-16· math.CO

The phylogenetic rank of a graph

Franklin Ashworth, Oliver Clarke, Jeffrey Giansiracusa, Jackson Jones, Julio Quijas-Aceves, Yue Ren

原始摘要(英文原文)· Original abstract
The Pachter-Sturmfels phylogenetic rank of a graph G is the minimal number of metric trees needed to embed G isometrically. Here, all edges of G are of length one and the product of metric trees is endowed with the supremum norm. We develop both a greedy and an exact algorithm for computing phylogenetic ranks. Using our algorithms, we construct a database of phylogenetic ranks which includes all graphs on 6 and 7 vertices. In particular, we exhibit examples disproving that the phylogenetic rank is hereditary, bounded by $\lceil \frac{n}{2} \rceil$, and a generalised 4-point conjecture by Pachter and Sturmfels. In addition, we show that the phylogenetic rank is subadditive under 1-sums and certain 2-vertex-sums, and that it is trivially upper bounded by n-1, where n denotes the number of vertices. We also provide a complete classification of graphs with phylogenetic rank 1 and construct several infinite families with phylogenetic rank $\lceil \frac{n}{2} \rceil$.
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