Anna Trubetskaya, Roland Haseneder, Volker Herdegen, Luis Leimbrock, Italo Pisanó, Yvonne Joseph, Carla Vogt, Stefan R. Kaschabek, Jan Zuber
High Resolution Image Download MS PowerPoint Slide This study evaluates the solvent-dependent extraction of Arthrospira platensis and Ascophyllum nodosum to guide sustainable marine biorefinery design. SOXTHERM rapid extractions were performed with n -hexane, ethanol–water (1:1, v/v), and water under controlled severity (3 h, n = 2). Ethanol–water consistently delivered the highest yields for A. platensis (25% DW ± 2.2) and A. nodosum (26% DW ± 2.2), with differences confirmed by a permutation test ( p < 0.05). Hexane selectively enriched lipophilic fractions, whereas water favored polar constituents. For A. platensis, ethanol–water exceeded hexane (Δ20.3% DW ± 2.5) and water (Δ15.0% DW ± 1.2). For A. nodosum, differences were smaller versus water (Δ3.5% DW ± 3.6) but pronounced versus hexane (Δ23.5% DW ± 1.5). A. platensis extracts were protein-rich and contained long-chain polyunsaturated fatty acids, while A. nodosum extracts exhibited a high mineral content and structural carbohydrates. Ultra-high-resolution FT-ICR-MS revealed thousands of molecular features, including putative lipid-like and nitrogenous species; all structural assignments remain putative without MS/MS confirmation. Notably, biopterin analogues were detected in A. platensis water extracts, and polyphenolic signatures dominated A. nodosum ethanol–water extracts. Operationally, ethanol–water is recommended for scouting wide compositional space, while processing micro- and macroalgae requires desalting and antifoam strategies to mitigate foaming during polar extractions.