Chujian Ma, Changhao Yin, Jingrui Liu, Changsheng Ma, Yajun Peng, Lamei Wu, Jincai Han, Wenyong Jin, Sa Yang, Dingfeng Luo, Lianyang Bai
Protoporphyrinogen oxidase (PPO) is an established herbicide target. Oxygen-substituted biaryl-pyridine derivatives were designed and synthesized through scaffold optimization. Greenhouse assays identified several compounds with strong postemergence activity at 150 g/ha. Compound 6a retained 75% inhibition against three broadleaf weeds at 9.375 g/ha and caused generally less crop injury than acifluorfen. No mortality or behavioral abnormalities were observed in honey bees treated with 6a or (±)-6b at 100 μg/bee. Molecular docking, molecular dynamics simulations, and molecular mechanics/Poisson-Boltzmann surface area (MM-PBSA) analyses supported stable interactions of 6a and an (R)-6b model with Nicotiana tabacum PPO (NtPPO). Surface plasmon resonance (SPR) confirmed direct binding of 6a and (±)-6b to NtPPO, with KD values of 41.20 and 38.60 nM, respectively. Density functional theory (DFT) calculations further supported 6a as a promising herbicidal lead.