Yue Qiao, yu xia, Jianfei Shi, Zihan Song, Liying Jin, Lijie Xuan, Haolin Yang, Xiang Yu, Ruoshi Wang, Haiyan Liu, Ali Zhang, Jinfeng Chen, Yingnan Hou
Plant small RNAs (sRNAs) are well established as intracellular regulators of gene expression and, more recently, as mediators of trans-kingdom RNA interference against invading pathogens. However, whether extracellular sRNAs can modulate plant immunity through host-intrinsic mechanisms remains largely unexplored. In this study, using the tomato-Phytophthora capsici pathosystem, we systematically profiled apoplastic sRNAs during infection and revealed selective enrichment of specific sRNAs in the apoplast. Among these, we found that miR408b is strongly induced upon pathogen invasion and preferentially accumulated extracellularly. Rather than entering pathogen cells, apoplastic miR408b functions as a mobile immune signal, moving systemically to distal tissues. We identified SlGAUT12, which encodes a galacturonosyltransferase required for homogalacturonan biosynthesis, as a direct target of miR408b and a negative regulator of tomato immunity. miR408b-mediated silencing of SlGAUT12 compromises cell wall integrity and promotes the accumulation of immunogenic oligogalacturonides, thereby robustly activating damage-associated molecular pattern (DAMP)-triggered immunity. Together, our findings reveal a previously unrecognized role for apoplastic miRNAs in coordinating systemic plant immunity through cell wall remodeling and DAMP signaling, providing new molecular targets for the development of RNA-based disease control strategies.