Tram Vo, Aïcha Hamieh, Marc Levy, Pierre Pontarotti, Jean-Marc Rolain, Vicky Merhej
NDM-producing K. pneumoniae in French Polynesia remain sporadic but genetically diverse, without evidence of local outbreak. This suggests a contribution of plasmid and Tn7722-associated elements to the diversity and evolution of carbapenem resistance. Ongoing genomic surveillance is vital to track the evolution of high-risk clones and MGEs guiding effective containment.
BACKGROUND: Klebsiella pneumoniae is an opportunistic pathogen responsible for invasive infections. The rise of carbapenem-resistant K. pneumoniae, largely driven by acquisition of blaNDM genes, represents a global health threat. In French Polynesia, sporadic cases of NDM-producing Enterobacteriales have been reported. This study characterizes the genomic features of NDM-producing K. pneumoniae isolates from French Polynesia and evaluates the roles of clonal expansion and mobile genetic element (MGE)-mediated horizontal gene transfer in blaNDM dissemination.
MATERIALS AND METHODS: Between July 2006 and September 2021, 17 carbapenemase-producing K. pneumoniae isolates were identified among 715 clinical samples in Tahiti. Whole-genome sequencing using Illumina MiSeq and Oxford Nanopore technologies was performed.
RESULTS: Seven NDM-producing K. pneumoniae strains were identified, five blaNDM-1 and two blaNDM-9 variants. All were resistant to ertapenem (MICs 1 to >32 mg/L), with three resistant to imipenem (MICs 8 to >32 mg/L) and six to meropenem (MICs 2 to >8 mg/L). A novel IS26-mediated composite transposon, Tn7722 (16,246 bp), carrying blaNDM-1, qnrS1 and aph(3')-VI genes, was detected in four isolates on IncF and IncR plasmids. Tn7722-like elements were found in diverse bacterial genomes worldwide, suggesting it facilitates blaNDM transmission across multiple species and regions.
CONCLUSION: NDM-producing K. pneumoniae in French Polynesia remain sporadic but genetically diverse, without evidence of local outbreak. This suggests a contribution of plasmid and Tn7722-associated elements to the diversity and evolution of carbapenem resistance. Ongoing genomic surveillance is vital to track the evolution of high-risk clones and MGEs guiding effective containment.